| Player | Team | Goals | Assists | Matches | |
|---|---|---|---|---|---|
| 1 | G. Lehtmets | Viimsi | 31 | 0 | 34 |
| 2 | K. Laasner | Tallinna Kalev II | 28 | 0 | 36 |
| 3 | K. Eerme | Laagri | 28 | 0 | 28 |
| 4 | K. Kriis | Laagri | 25 | 0 | 35 |
| 5 | K. Nesterov | FC Tallinn | 20 | 0 | 35 |
| 6 | H. Käblik | FCI Levadia II | 18 | 0 | 32 |
| 7 | A. Volkov | FC Tallinn | 18 | 0 | 26 |
| 8 | Erki Mõttus | Tartu Welco | 15 | 0 | 32 |
| 9 | Maksim Kalimullin | Flora II | 15 | 0 | 20 |
| 10 | T. Pajo | Flora II | 13 | 0 | 14 |
| 11 | A. Kose | Laagri | 12 | 0 | 35 |
| 12 | M. Villems | Elva | 12 | 0 | 34 |
| 13 | G. Rõivassepp | Flora II | 11 | 0 | 21 |
| 14 | D. Rudenko | Laagri | 10 | 0 | 17 |
| 15 | V. Plotnikov | FC Tallinn | 10 | 0 | 14 |
| 16 | A. Sikk | Laagri | 9 | 0 | 34 |
| 17 | R. Lukas | Flora II | 9 | 0 | 32 |
| 18 | K. Põldsaar | Elva | 9 | 0 | 30 |
| 19 | N. Krimm | Viimsi | 8 | 0 | 34 |
| 20 | Mark William Mugra | Tartu Welco | 8 | 0 | 33 |